Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802385.1_cds_XP_016479093.1_7028
CDS Infomation

[gene=LOC107800434] [db_xref=GeneID:107800434] [protein=uncharacterized protein LOC107800434] [protein_id=XP_016479093.1] [location=join(17102..17153,18454..18542,18654..19074,19134..20653,22318..22516,22970..23568)] [gbkey=CDS]
Sequence

ATGGAGAAAAGTCGTCACAGAAAGTCCAGAAGTGCTTCGGGAATTATGGAAGGAAGTAGA
CTAGCTCAGAAACAGATTGCTACAACAAAAGTGGCTCTAAATTCTCGTTCCTACAGTGAT
GGAACTGCTAGGGGAGATATGATTATGCTTGATTTAAGGAAGAGCTCTTCCAAAGGAGTT
ACTGGGACACCAATTAAGAAATTGCTTGCAGAAGAAATGGCAAAAGAAGAAGGCGAATCA
AAGAGAAGGCCGCCCAGCATTGTTGCCAGATTGATGGGTCTCGAAGGGATGCCATCTCCG
CAGCATGTTGGCAGACAACAAAGAAGGTTATCAGACAGCTGCCAACACAGAAATGAACAG
ATAGATCACAGGAGGAGGCAACTGTTCGATGAACAATCTAGTAAAAGAAGCTCCATGGAG
CACCAAGAATTCAAGGATGTGTATGAGGATTTGGAAGCATCGCATGTTGCCAACCGTCGT
CATTCATCAAGATGGAGTGAAACCGGTAGATTTGCTACTCCTGATATGGCCCTTATACAG
CAGAAATTTATGGATGCAAAACAATTTCATGACACTCTTGAGGCGCTTGAATCAAATAAG
GAATTATTGATAAAGTATCTTCAGGGACCAGATCCCTTGTTTGTGAAGCACCTGCAGGAT
CTGCAAGTTGACACTGCTAGTTCTATGTGCAGTCACATAGCAGTTTTAAAGCCATCAAAT
TCTGTGAAATATGAAGGCAGTGTCAAATCCTCCAAATCTGGTAGAGGCGATTCACGTAAA
CAAGACATCAACTTGCAGAAAGAGCGCATTGATGGTCTCTTACTCCAGTCACAGCATCGT
CATAGTGGACATAATTCCCAAAAGTCATCACCAGTTTTTCCTGAAGGAAAGGAGGAAAAT
ATTCTTCCAACAAGAATTGTTGTTCTAAAGCCGAACGTTGGGATAACACAAAGTGATGTT
ACTTCTGTTCCATATCACCCTGACATGAGGAAGCATGCACAACATCCTCGGGCTTCACCT
GGGGGAGCAGGACTAGAGGAAAAGAAAAGTTCATCTAAGAATATGGGGATATCAAGGCCC
AAGTCAAAAGAAGCAAGAGATATTGCAAAGGAAATTACGAGGCGGATGCGGGACTCTTTT
GGGCCTTCTGATGGTGGGGATGGATATTTTAGAAGTTTTGGTTTTAAAGGATATGCTGGA
GATGAAAGCTCTTGTGATGTGTATGAAAGTGATTCGACTGGTGAGTCAGACATTACAACT
TTGTCTGGTAGGAAGTCATTTGGCAGGGGTAATCTGAAAAAATCTTCATCGCAAGGTTCT
TCTGAATCATCAGTGGGCAGGGAGGCAAAAAAGAGGTTGTCTGAGAGGTGGAAGATGACT
CAATATTATCAAGACATTGAAATGGCTGGTAAGAGTAGTACACTTGGTGAAATGCTTTCT
TTACCTGATGGGGTAACCAAACCCGATCATTGTGATACCATGATGCATGTTGAAGAAGCC
ACTATCGAACTTGTTGGCAGGAAAGGAACTGCTGAATGGGATTTCCCTTTGGGTATTAGT
AGTAGAGATGGTTGGAAGGATGTATGCATTAATGATTCATCAGGATACAGGTCAACTTCT
CCGCCTTTTGGCAGCAACAAGCATAGAACCAGAGGACGAAGGGAAGTTTTTTCTAATTGG
CAATCCTCAATTCCCAAAGATCCCGTAAATAGGGAACAGTCTGTAAATCACCGCAGAAGT
AGGTCATTGGATGGTATACTGAATTTGAGAGATGAATTCTTATCCAAAGACTCTAGATCT
AGCAAGAAGAAACTTCATTCCGGTCGTCTTGGTAGTGGCTCCTCATCAAAAGGCAAGCTA
AGCCAGAGAATTGACATGAACCTAGAAGAAAATCAATCTGAGAAGCTGCCTTTAGCTTTG
CAGGTGCCTGCTGCAGATGACACGCGTTATATTAATGCTTCGGATAATGCTGAAACCGAG
AGTATAACCCTGTCATCAGAATATTCTGTTGAGATGCTTCAAAAGCTACCTGCAGAATGT
TGCAGTGCTTCTCCTCTTAACCAAGAGGTTTCAGTTCCTCAGGCAGTACTTCCAGAACCA
TCACCACCATCACCTGCAGCAGCTTCTGTTCTTTTGGAGTATCCTGCACCTGAACCTGAG
TCGTCAGTAAGCTCCAAGGAGGCTGATCATCCTAGTCCGCTTTCAGTTCTGGAGGTTCCA
TTTACAGAAGATGCATCTTCTGGTTCAGAATGCTTCGAGAGAGTCAGTGCTGAACTTAAT
GAGCTTCGGATGCAACTGAAGCTCCTCAAAATGGAGTCAGAGGCTTATGCTGATGTAGTA
GTAAGTGATGAAGAGGTTGAAGGACCATTAGCCGAGGCCTTCGAAGACAAGTGTAGTTTA
AGGTCCCAAAGCTGGCAAACTTATTACACATTAGATGTGCTCACAGACTCTGGCTTGAGG
GCATCCGATCCTGACACATTCGTAACATCTTGCCACTCTCTGGACTCTCCTTTGGCTCCC
TGGATTTTTGACAACCTTGAAAAGAAGTACACTGATGAAACAACTGGACCGAGATATGAA
AGGCAGATACTGTTCGACCGTATAAATATCAGTCTGTTGGAGATTCTCAGGAAGTATGTG
GATCCTTGCCCGTGGGTGAAGCCAATAGAGGGTATTAACTGGAAGTGGCAGAAATATGGG
ATGATGAATATGCTGCAGCATCTGCTGAGAAGCCATGAAAATGCTGCAAATGCAGACACG
CCCGCTAATATTGTGGAAGAGATGCATTGGCTAGAACTCAAGGATGACATTGATCTGATA
GGTAAGGAAATTGAGAAACTGTTGATAGAAGACCTCATAGTAGAAGTTGTAACTATGTAG

Peptide Sequence

PEP ID

XP_016479093.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107800434 [Nicotiana tabacum]
Sequence

MEKSRHRKSRSASGIMEGSRLAQKQIATTKVALNSRSYSDGTARGDMIMLDLRKSSSKGV
TGTPIKKLLAEEMAKEEGESKRRPPSIVARLMGLEGMPSPQHVGRQQRRLSDSCQHRNEQ
IDHRRRQLFDEQSSKRSSMEHQEFKDVYEDLEASHVANRRHSSRWSETGRFATPDMALIQ
QKFMDAKQFHDTLEALESNKELLIKYLQGPDPLFVKHLQDLQVDTASSMCSHIAVLKPSN
SVKYEGSVKSSKSGRGDSRKQDINLQKERIDGLLLQSQHRHSGHNSQKSSPVFPEGKEEN
ILPTRIVVLKPNVGITQSDVTSVPYHPDMRKHAQHPRASPGGAGLEEKKSSSKNMGISRP
KSKEARDIAKEITRRMRDSFGPSDGGDGYFRSFGFKGYAGDESSCDVYESDSTGESDITT
LSGRKSFGRGNLKKSSSQGSSESSVGREAKKRLSERWKMTQYYQDIEMAGKSSTLGEMLS
LPDGVTKPDHCDTMMHVEEATIELVGRKGTAEWDFPLGISSRDGWKDVCINDSSGYRSTS
PPFGSNKHRTRGRREVFSNWQSSIPKDPVNREQSVNHRRSRSLDGILNLRDEFLSKDSRS
SKKKLHSGRLGSGSSSKGKLSQRIDMNLEENQSEKLPLALQVPAADDTRYINASDNAETE
SITLSSEYSVEMLQKLPAECCSASPLNQEVSVPQAVLPEPSPPSPAAASVLLEYPAPEPE
SSVSSKEADHPSPLSVLEVPFTEDASSGSECFERVSAELNELRMQLKLLKMESEAYADVV
VSDEEVEGPLAEAFEDKCSLRSQSWQTYYTLDVLTDSGLRASDPDTFVTSCHSLDSPLAP
WIFDNLEKKYTDETTGPRYERQILFDRINISLLEILRKYVDPCPWVKPIEGINWKWQKYG
MMNMLQHLLRSHENAANADTPANIVEEMHWLELKDDIDLIGKEIEKLLIEDLIVEVVTM

Transcript Sequence

Gene sequence data has not been registered.